MolNFT v1 · #7838 · DNA

The NMR structure of DNA dodecamer determined in aqueous dilute liquid crystalline phase

1GIP · 5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3': “The NMR structure of DNA dodecamer determined in aqueous dilute liquid crystalline phase”. Solution nmr. MolNFT v1 #7838 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 1GIP
Type: DNA
Length: 24 nucleotides
Chains: 2
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: 5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'

Structure

solution nmr · 1 distinct chain.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	5'-D(CPGPCPGPAPAPTPTPCPGPCPG)-3'	dna	12	—	—

Interfaces

1 interface between chains.

A–B · 581 Å² buried · 44 hydrogen bonds · nucleic-nucleic

Compared structures

1GIP · The NMR structure of DNA dodecamer determined in aqueous dilute liquid crystalline phase · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Elsewhere: RCSB PDB 1GIP · PDBe 1GIP

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