MolNFT v1 · #78135 · protein
The crystal structure of a E280A mutant of the catalytic domain of amsh
3RZV · Stam-binding protein: “The crystal structure of a E280A mutant of the catalytic domain of amsh”. X-ray diffraction, 1 ligand (ZN), 1 pocket (best druggability 0.46). MolNFT v1 #78135 on GenesisL1: 3D structure, binding sites and…
- PDB
- 3RZV
- Type
- protein
- Length
- 179 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Stam-binding protein
- EC
- 3.4.19.-
- UniProt
- O95630
- Ligands
- ZN
- Pockets
- 1 · best druggability 0.46
Structure
x-ray diffraction · 1 distinct chain · 26% helix, 35% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Stam-binding protein (EC 3.4.19.-) | protein | 179 | 26% helix, 35% strand | O95630 |
Ligands and binding sites
- ZN · Zinc ion · metal · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 113 | 0.46 | 0.78 | 20 | empty |
Compared structures
- 3RZV · The Crystal Structure of a E280A Mutant of the Catalytic Domain of AMSH · the same entry in another collection · chain A against A, TM-score 1.00
- O95630 · AlphaFold monomer V2.0 prediction for stam-binding protein (O95630) · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O95630
- Elsewhere: RCSB PDB 3RZV · PDBe 3RZV · UniProt O95630
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