MolNFT v1 · #78132 · protein
Apis mellifera OBP14 in complex with TA6BR14
3RZS: “Apis mellifera OBP14 in complex with TA6BR14”. X-ray diffraction, 1 ligand (TBR), 1 pocket (best druggability 0.76). MolNFT v1 #78132 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 3RZS
- Type
- protein
- Length
- 119 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- OBP14
- UniProt
- Q1W640
- Ligands
- TBR
- Pockets
- 1 · best druggability 0.76
Structure
x-ray diffraction · 1 distinct chain · 66% helix, 2% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | OBP14 | protein | 119 | 66% helix, 2% strand | Q1W640 |
Ligands and binding sites
- TBR · Hexatantalum dodecabromide · ligand · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 79 | 0.76 | 0.98 | 17 | empty |
Modifications
Observed in the structure: 2 disulfide (disulfide).
Compared structures
- 3RZS · Apis mellifera OBP14 in complex with Ta6Br14 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q1W640
- Elsewhere: RCSB PDB 3RZS · PDBe 3RZS · UniProt Q1W640
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