MolNFT v1 · #7767 · protein

Human cellular retinol binding protein III

1GGL · Protein (cellular retinol-binding protein III): “Human cellular retinol binding protein III”. X-ray diffraction, 1 pocket (best druggability 0.90). MolNFT v1 #7767 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 1GGL
Type: protein
Length: 268 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Protein (cellular retinol-binding protein III)
UniProt: P82980
Pockets: 1 · best druggability 0.90

Structure

x-ray diffraction · 1 distinct chain · 7% helix, 54% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	Protein (cellular retinol-binding protein III)	protein	134	7% helix, 54% strand	P82980

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	829	0.90	0.93	89	empty

Interfaces

1 interface between chains.

A–B · 560 Å² buried · 7 hydrogen bonds · protein-protein

Compared structures

1GGL · Human cellular retinol binding protein III · the same entry in another collection · chain A against A, TM-score 1.00
P82980 · AlphaFold monomer V2.0 prediction for retinol-binding protein 5 (P82980) · a predicted model of the same protein · chain A against A, TM-score 0.97

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P82980
Elsewhere: RCSB PDB 1GGL · PDBe 1GGL · UniProt P82980

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