MolNFT v1 · #77505 · protein

Crystal structure of a tetr-like transcriptional regulator (SAMA_0099) from shewanella amazonensis SB2B at 2.42 a resolution

3RH2 · Hypothetical tetr-like transcriptional regulator: “Crystal structure of a tetr-like transcriptional regulator (SAMA_0099) from shewanella amazonensis SB2B at…”. X-ray diffraction, 2 ligands (UNL, PO4), 2 pockets (best druggability…

PDB: 3RH2
Type: protein
Length: 210 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Hypothetical tetr-like transcriptional regulator
UniProt: A1S1Q5
Ligands: UNL, PO4
Pockets: 2 · best druggability 0.80

Structure

x-ray diffraction · 1 distinct chain · 79% helix, 1% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Hypothetical tetr-like transcriptional regulator	protein	210	79% helix, 1% strand	A1S1Q5

Ligands and binding sites

UNL · Unknown ligand · ligand · chains A
PO4 · Phosphate ion · ion · 2 copies · chains A
GOL · Glycerol · additive · 6 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	216	0.80	0.93	30	UNL
2	70	0.35	0.77	15	empty

Modifications

Observed in the structure: 7 modified (engineered).

Compared structures

3RH2 · Crystal structure of a TetR-like transcriptional regulator (Sama_0099) from Shewanella… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A1S1Q5
Elsewhere: RCSB PDB 3RH2 · PDBe 3RH2 · UniProt A1S1Q5

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