MolNFT v1 · #77161 · protein
Crystal structure of a zinc-containing hit family protein from encephalitozoon cuniculi
3R6F: “Crystal structure of a zinc-containing hit family protein from encephalitozoon cuniculi”. X-ray diffraction, 2 ligands (ZN, SO4), 1 pocket (best druggability 0.37). MolNFT v1 #77161 on GenesisL1: 3D structure, binding sites and…
- PDB
- 3R6F
- Type
- protein
- Length
- 130 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Hit family protein
- UniProt
- Q8SRE4
- Ligands
- ZN, SO4
- Pockets
- 1 · best druggability 0.37
Structure
x-ray diffraction · 1 distinct chain · 33% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Hit family protein | protein | 130 | 33% helix, 18% strand | Q8SRE4 |
Ligands and binding sites
- ZN · Zinc ion · metal · chains A
- SO4 · Sulfate ion · ion · chains A
- MPD · (4S)-2-methyl-2,4-pentanediol · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 110 | 0.37 | 0.74 | 24 | SO4, MPD |
Compared structures
- 3R6F · Crystal structure of a zinc-containing HIT family protein from Encephalitozoon cuniculi · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8SRE4
- Elsewhere: RCSB PDB 3R6F · PDBe 3R6F · UniProt Q8SRE4
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