MolNFT v1 · #77069 · protein
Crystal structure of the yeast VPS23 uev domain
3R3Q · Suppressor protein STP22 of temperature-sensitive alpha…: “Crystal structure of the yeast VPS23 uev domain”. X-ray diffraction, 2 ligands (ZN, CL), 1 pocket (best druggability 0.33). MolNFT v1 #77069 on GenesisL1: 3D structure…
- PDB
- 3R3Q
- Type
- protein
- Length
- 153 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Suppressor protein STP22 of temperature-sensitive alpha- factor receptor and arginine…
- UniProt
- P25604
- Ligands
- ZN, CL
- Pockets
- 1 · best druggability 0.33
Structure
x-ray diffraction · 1 distinct chain · 32% helix, 23% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Suppressor protein STP22 of temperature-sensitive alpha- factor receptor and arginine permease | protein | 153 | 32% helix, 23% strand | P25604 |
Ligands and binding sites
- ZN · Zinc ion · metal · 9 copies · chains A
- CL · Chloride ion · ion · chains A
- IMD · Imidazole · additive · 7 copies · chains A
- ACT · Acetate ion · additive · 4 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 57 | 0.33 | 0.77 | 11 | empty |
Compared structures
- 3R3Q · Crystal structure of the yeast Vps23 UEV domain · the same entry in another collection · chain A against A, TM-score 1.00
- P25604 · AlphaFold monomer V2.0 prediction for suppressor protein STP22 of temperature-sensitive… · a predicted model of the same protein · chain A against A, TM-score 0.90
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P25604
- Elsewhere: RCSB PDB 3R3Q · PDBe 3R3Q · UniProt P25604
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.