MolNFT v1 · #76910 · protein
Structure of treponema denticola factor H binding protein (fhbb), selenomethionine derivative
3QZ0: “Structure of treponema denticola factor H binding protein (fhbb), selenomethionine derivative”. X-ray diffraction, 1 ligand (SCN), 2 pockets (best druggability 0.78). MolNFT v1 #76910 on GenesisL1: 3D structure, binding sites and…
- PDB
- 3QZ0
- Type
- protein
- Length
- 157 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Factor H binding protein
- UniProt
- Q73RI0
- Ligands
- SCN
- Pockets
- 2 · best druggability 0.78
Structure
x-ray diffraction · 2 distinct chains · 54% helix, 15% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Factor H binding protein | protein | 78 | 53% helix, 15% strand | Q73RI0 |
| B | Factor H binding protein | protein | 79 | 56% helix, 15% strand | Q73RI0 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 157 | 0.78 | 0.94 | 22 | empty |
| 2 | 61 | 0.28 | 0.73 | 13 | empty |
Interfaces
1 interface between chains.
- A–B · 577 Ų buried · 0 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 4 modified (engineered).
Compared structures
- 3QZ0 · Structure of Treponema denticola Factor H Binding protein (FhbB), selenomethionine… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q73RI0
- Elsewhere: RCSB PDB 3QZ0 · PDBe 3QZ0 · UniProt Q73RI0
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