MolNFT v1 · #76690 · protein

Crystal structure of NAD-binding phosphogluconate dehydrogenase-like protein from alicyclobacillus acidocaldarius

3QSG: “Crystal structure of NAD-binding phosphogluconate dehydrogenase-like protein from alicyclobacillus…”. X-ray diffraction, 1 ligand (CL), 1 pocket (best druggability 0.62). MolNFT v1 #76690 on GenesisL1: 3D structure, binding sites…

PDB: 3QSG
Type: protein
Length: 285 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: NAD-binding phosphogluconate dehydrogenase-like protein
UniProt: C8WX00
Ligands: CL
Pockets: 1 · best druggability 0.62

Structure

x-ray diffraction · 1 distinct chain · 60% helix, 13% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	NAD-binding phosphogluconate dehydrogenase-like protein	protein	285	60% helix, 13% strand	C8WX00

Ligands and binding sites

CL · Chloride ion · ion · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	385	0.62	0.77	38	CL

Modifications

Observed in the structure: 5 modified (engineered).

Compared structures

3QSG · Crystal structure of NAD-binding phosphogluconate dehydrogenase-like protein from… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt C8WX00
Elsewhere: RCSB PDB 3QSG · PDBe 3QSG · UniProt C8WX00

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