MolNFT v1 · #76195 · protein

Crystal structure of W95L beta-2 microglobulin

3QDA · Beta-2-microglobulin: “Crystal structure of W95L beta-2 microglobulin”. X-ray diffraction, 1 pocket (best druggability 0.28). MolNFT v1 #76195 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 3QDA
Type: protein
Length: 100 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Beta-2-microglobulin
UniProt: P61769
Pockets: 1 · best druggability 0.28

Structure

x-ray diffraction · 1 distinct chain · 0% helix, 50% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Beta-2-microglobulin	protein	100	0% helix, 50% strand	P61769

Ligands and binding sites

PGE · Triethylene glycol · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	62	0.28	0.73	15	empty

Modifications

Observed in the structure: 1 disulfide (disulfide).

Compared structures

3QDA · Crystal structure of W95L beta-2 microglobulin · the same entry in another collection · chain A against A, TM-score 1.00
P61769 · AlphaFold monomer V2.0 prediction for beta-2-microglobulin (P61769) · a predicted model of the same protein · chain A against A, TM-score 0.88

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P61769
Elsewhere: RCSB PDB 3QDA · PDBe 3QDA · UniProt P61769

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.