MolNFT v1 · #76043 · protein
Crystal structure of anopheles gambiae odorant binding protein 4 in complex with indole
3Q8I: “Crystal structure of anopheles gambiae odorant binding protein 4 in complex with indole”. X-ray diffraction, 2 ligands (IND, PO4), 1 pocket (best druggability 0.83). MolNFT v1 #76043 on GenesisL1: 3D structure, binding sites and…
- PDB
- 3Q8I
- Type
- protein
- Length
- 123 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Odorant binding protein
- UniProt
- Q8T6R7
- Ligands
- IND, PO4
- Pockets
- 1 · best druggability 0.83
Structure
x-ray diffraction · 1 distinct chain · 67% helix, 2% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Odorant binding protein | protein | 123 | 67% helix, 2% strand | Q8T6R7 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 368 | 0.83 | 0.91 | 35 | IND |
Modifications
Observed in the structure: 3 disulfide (disulfide).
Compared structures
- 3Q8I · Crystal structure of Anopheles Gambiae odorant binding protein 4 in complex with indole · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8T6R7
- Elsewhere: RCSB PDB 3Q8I · PDBe 3Q8I · UniProt Q8T6R7
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