MolNFT v1 · #75452 · protein
Crystal structure of the bacteriophage PHI92 membrane-piercing protein GP138
3PQI · Gene product 138: “Crystal structure of the bacteriophage PHI92 membrane-piercing protein GP138”. X-ray diffraction, 2 ligands (FE, K), 1 pocket (best druggability 0.46). MolNFT v1 #75452 on GenesisL1: 3D structure, binding sites…
- PDB
- 3PQI
- Type
- protein
- Length
- 202 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Gene product 138
- Ligands
- FE, K
- Pockets
- 1 · best druggability 0.46
Structure
x-ray diffraction · 1 distinct chain · 0% helix, 43% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Gene product 138 | protein | 202 | 0% helix, 43% strand | — |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 176 | 0.46 | 0.75 | 31 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Compared structures
- 3PQI · Crystal structure of the bacteriophage phi92 membrane-piercing protein gp138 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 3PQI · PDBe 3PQI
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