MolNFT v1 · #75395 · protein
Crystal structure of E.COLI ompf porin in lipidic cubic phase: space group H32, large unit cell
3POU · Ompf protein: “Crystal structure of E.COLI ompf porin in lipidic cubic phase: space group H32, large unit cell”. X-ray diffraction, 2 pockets (best druggability 0.71). MolNFT v1 #75395 on GenesisL1: 3D structure, binding sites and…
- PDB
- 3POU
- Type
- protein
- Length
- 340 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Ompf protein
- UniProt
- C5W2U9
- Pockets
- 2 · best druggability 0.71
Structure
x-ray diffraction · 1 distinct chain · 3% helix, 59% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ompf protein | protein | 340 | 3% helix, 59% strand | C5W2U9 |
Ligands and binding sites
- OLC · (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate · additive · 4 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 988 | 0.71 | 0.75 | 73 | empty |
| 2 | 273 | 0.50 | 0.74 | 41 | empty |
Compared structures
- 3POU · Crystal structure of E.coli OmpF porin in lipidic cubic phase: space group H32, large… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt C5W2U9
- Elsewhere: RCSB PDB 3POU · PDBe 3POU · UniProt C5W2U9
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