MolNFT v1 · #75365 · protein

Crystal structure of SAMP1 from haloferax volcanii

3PO0 · Small archaeal modifier protein 1: “Crystal structure of SAMP1 from haloferax volcanii”. X-ray diffraction, 2 ligands (CD, MG). MolNFT v1 #75365 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 3PO0
Type: protein
Length: 89 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Small archaeal modifier protein 1
UniProt: D4GUF6
Ligands: CD, MG

Structure

x-ray diffraction · 1 distinct chain · 28% helix, 29% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Small archaeal modifier protein 1	protein	89	28% helix, 29% strand	D4GUF6

Ligands and binding sites

CD · Cadmium ion · metal · 2 copies · chains A
MG · Magnesium ion · metal · 2 copies · chains A
ACT · Acetate ion · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

3PO0 · Crystal structure of SAMP1 from Haloferax volcanii · the same entry in another collection · chain A against A, TM-score 1.00
D4GUF6 · AlphaFold monomer V2.0 prediction for small archaeal modifier protein 1 (D4GUF6) · a predicted model of the same protein · chain A against A, TM-score 0.94

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt D4GUF6
Elsewhere: RCSB PDB 3PO0 · PDBe 3PO0 · UniProt D4GUF6

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