MolNFT v1 · #75308 · protein
Crystal structure of the sporulation inhibitor PXO1-118 from bacillus anthracis
3PMD · Conserved domain protein: “Crystal structure of the sporulation inhibitor PXO1-118 from bacillus anthracis”. X-ray diffraction, 2 ligands (11A, CL), 1 pocket (best druggability 0.80). MolNFT v1 #75308 on GenesisL1: 3D structure…
- PDB
- 3PMD
- Type
- protein
- Length
- 153 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Conserved domain protein
- UniProt
- Q44635
- Ligands
- 11A, CL
- Pockets
- 1 · best druggability 0.80
Structure
x-ray diffraction · 1 distinct chain · 76% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Conserved domain protein | protein | 153 | 76% helix, 0% strand | Q44635 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 130 | 0.80 | 0.98 | 31 | 11A, CL |
Compared structures
- 3PMD · Crystal structure of the sporulation inhibitor pXO1-118 from Bacillus anthracis · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q44635
- Elsewhere: RCSB PDB 3PMD · PDBe 3PMD · UniProt Q44635
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