MolNFT v1 · #75115 · protein

Crystal structure of PA4794 - gnat superfamily protein in complex with accoa

3PGP · Uncharacterized protein PA4794: “Crystal structure of PA4794 - gnat superfamily protein in complex with accoa”. X-ray diffraction, 2 ligands (ACO, CL), 1 pocket (best druggability 0.66). MolNFT v1 #75115 on GenesisL1: 3D structure…

PDB: 3PGP
Type: protein
Length: 159 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Uncharacterized protein PA4794
UniProt: Q9HV14
Ligands: ACO, CL
Pockets: 1 · best druggability 0.66

Structure

x-ray diffraction · 1 distinct chain · 34% helix, 37% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Uncharacterized protein PA4794	protein	159	34% helix, 37% strand	Q9HV14

Ligands and binding sites

ACO · Acetyl coenzyme *A · ligand · chains A
CL · Chloride ion · ion · chains A
EDO · 1,2-ethanediol · additive · 7 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	282	0.66	0.82	36	ACO, EDO, CL

Compared structures

3PGP · Crystal structure of PA4794 - GNAT superfamily protein in complex with AcCoA · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9HV14
Elsewhere: RCSB PDB 3PGP · PDBe 3PGP · UniProt Q9HV14

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