MolNFT v1 · #75090 · protein
The catalytic domain of human OTUD5
3PFY · Otu domain-containing protein 5: “The catalytic domain of human OTUD5”. X-ray diffraction, 2 ligands (SO4, UNX). MolNFT v1 #75090 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 3PFY
- Type
- protein
- Length
- 129 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Otu domain-containing protein 5
- EC
- 3.4.19.12
- UniProt
- Q96G74
- Ligands
- SO4, UNX
Structure
x-ray diffraction · 1 distinct chain · 48% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Otu domain-containing protein 5 (EC 3.4.19.12) | protein | 129 | 48% helix, 17% strand | Q96G74 |
Ligands and binding sites
- SO4 · Sulfate ion · ion · chains A
- UNX · Unknown atom or ion · ion · chains A
- PEG · Di(hydroxyethyl)ether · additive · 2 copies · chains A
- PG4 · Tetraethylene glycol · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Modifications
Observed in the structure: 8 modified (engineered).
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q96G74
- Elsewhere: RCSB PDB 3PFY · PDBe 3PFY · UniProt Q96G74
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