MolNFT v1 · #75066 · protein

Crystal structure of the lactobacillus johnsonii cinnamoyl esterase LJ0536 S106A mutant

3PF9: “Crystal structure of the lactobacillus johnsonii cinnamoyl esterase LJ0536 S106A mutant”. X-ray diffraction, 1 ligand (NA), 1 pocket (best druggability 0.51). MolNFT v1 #75066 on GenesisL1: 3D structure, binding sites and pockets in…

PDB: 3PF9
Type: protein
Length: 251 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Cinnamoyl esterase
EC: 3.1.1.-
UniProt: D3YEX6
Ligands: NA
Pockets: 1 · best druggability 0.51

Structure

x-ray diffraction · 1 distinct chain · 35% helix, 28% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Cinnamoyl esterase (EC 3.1.1.-)	protein	251	35% helix, 28% strand	D3YEX6

Ligands and binding sites

NA · Sodium ion · metal · 4 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	107	0.51	0.82	28	empty

Compared structures

3PF9 · Crystal structure of the Lactobacillus johnsonii cinnamoyl esterase LJ0536 S106A mutant · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt D3YEX6
Elsewhere: RCSB PDB 3PF9 · PDBe 3PF9 · UniProt D3YEX6

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