MolNFT v1 · #74762 · protein
Crystal structure of a putative secreted protein (BF4250) from bacteroides fragilis nctc 9343 at 2.05 a resolution
3P69 · Uncharacterized protein: “Crystal structure of a putative secreted protein (BF4250) from bacteroides fragilis nctc 9343 at 2.05 a…”. X-ray diffraction, 1 ligand (CL), 1 pocket (best druggability 0.56). MolNFT v1 #74762 on GenesisL1…
- PDB
- 3P69
- Type
- protein
- Length
- 256 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Uncharacterized protein
- UniProt
- Q5L7M9
- Ligands
- CL
- Pockets
- 1 · best druggability 0.56
Structure
x-ray diffraction · 2 distinct chains · 5% helix, 53% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Uncharacterized protein | protein | 125 | 6% helix, 54% strand | Q5L7M9 |
| B | Uncharacterized protein | protein | 131 | 5% helix, 52% strand | Q5L7M9 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 201 | 0.56 | 0.79 | 34 | CL |
Interfaces
1 interface between chains.
- A–B · 665 Ų buried · 4 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 2 modified (engineered).
Compared structures
- 3P69 · Crystal structure of a putative secreted protein (BF4250) from Bacteroides fragilis NCTC… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5L7M9
- Elsewhere: RCSB PDB 3P69 · PDBe 3P69 · UniProt Q5L7M9
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.