MolNFT v1 · #74756 · protein

Structure of M. laminosus ferredoxin with a shorter L1,2 loop

3P63: “Structure of M. laminosus ferredoxin with a shorter L1,2 loop”. X-ray diffraction, 1 ligand (FES). MolNFT v1 #74756 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 3P63
Type: protein
Length: 190 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Ferredoxin
UniProt: P00248
Ligands: FES

Structure

x-ray diffraction · 1 distinct chain · 16% helix, 33% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	Ferredoxin	protein	95	16% helix, 33% strand	P00248

Ligands and binding sites

FES · Fe2/s2 (inorganic) cluster · ligand · 2 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Interfaces

1 interface between chains.

A–B · 483 Å² buried · 7 hydrogen bonds · protein-protein

Compared structures

3P63 · Structure of M. laminosus Ferredoxin with a shorter L1,2 loop · the same entry in another collection · chain A against A, TM-score 1.00
P00248 · AlphaFold monomer V2.0 prediction for ferredoxin (P00248) · a predicted model of the same protein · chain B against A, TM-score 0.98

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P00248
Elsewhere: RCSB PDB 3P63 · PDBe 3P63 · UniProt P00248

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.