MolNFT v1 · #74721 · protein
Crystal structure of the japanese encephalitis virus envelope protein, strain sa-14-14-2.
3P54 · Envelope glycoprotein: “Crystal structure of the japanese encephalitis virus envelope protein, strain sa-14-14-2.”. X-ray diffraction, 1 pocket (best druggability 0.36). MolNFT v1 #74721 on GenesisL1: 3D structure, binding sites and…
- PDB
- 3P54
- Type
- protein
- Length
- 404 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Envelope glycoprotein
- UniProt
- Q99DQ9
- Pockets
- 1 · best druggability 0.36
Structure
x-ray diffraction · 1 distinct chain · 8% helix, 52% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Envelope glycoprotein | protein | 404 | 8% helix, 52% strand | Q99DQ9 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 106 | 0.36 | 0.74 | 28 | empty |
Modifications
Observed in the structure: 6 disulfide (disulfide).
Compared structures
- 3P54 · Crystal Structure of the Japanese Encephalitis Virus Envelope Protein, strain SA-14-14-2. · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q99DQ9
- Elsewhere: RCSB PDB 3P54 · PDBe 3P54 · UniProt Q99DQ9
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