MolNFT v1 · #73548 · protein
DNA polymerase D large subunit DP2(1-300) from pyrococcus horikoshii
3O59 · DNA polymerase II large subunit: “DNA polymerase D large subunit DP2(1-300) from pyrococcus horikoshii”. X-ray diffraction. MolNFT v1 #73548 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 3O59
- Type
- protein
- Length
- 244 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- DNA polymerase II large subunit
- EC
- 2.7.7.7
- UniProt
- O57861
Structure
x-ray diffraction · 1 distinct chain · 57% helix, 9% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| X | DNA polymerase II large subunit (EC 2.7.7.7) | protein | 244 | 57% helix, 9% strand | O57861 |
Modifications
Observed in the structure: 4 modified (engineered).
Compared structures
- 3O59 · DNA polymerase D large subunit DP2(1-300) from Pyrococcus horikoshii · the same entry in another collection · chain X against X, TM-score 1.00
- O57861 · AlphaFold monomer V2.0 prediction for DNA polymerase II large subunit (O57861) · a predicted model of the same protein · chain X against A, TM-score 0.96
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O57861
- Elsewhere: RCSB PDB 3O59 · PDBe 3O59 · UniProt O57861
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