MolNFT v1 · #73120 · protein

Crystal structure of insect beta-N-acetyl-D-hexosaminidase OFHEX1 from ostrinia furnacalis

3NSM · N-acetylglucosaminidase: “Crystal structure of insect beta-N-acetyl-D-hexosaminidase OFHEX1 from ostrinia furnacalis”. X-ray diffraction, 3 pockets (best druggability 0.67). MolNFT v1 #73120 on GenesisL1: 3D structure, binding sites…

PDB: 3NSM
Type: protein
Length: 572 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: N-acetylglucosaminidase
EC: 3.2.1.52
UniProt: Q06GJ0
Pockets: 3 · best druggability 0.67

Structure

x-ray diffraction · 1 distinct chain · 33% helix, 21% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	N-acetylglucosaminidase (EC 3.2.1.52)	protein	572	33% helix, 21% strand	Q06GJ0

Pockets

3 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	319	0.67	0.82	43	empty
2	184	0.55	0.79	25	empty
3	79	0.54	0.86	14	empty

Modifications

Observed in the structure: 6 disulfide (disulfide).

Compared structures

3NSM · Crystal Structure of insect beta-N-acetyl-D-hexosaminidase OfHex1 from Ostrinia furnacalis · the same entry in another collection · chain A against A, TM-score 1.00
Q06GJ0 · AlphaFold monomer V2.0 prediction for chitooligosaccharidolytic beta… · a predicted model of the same protein · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q06GJ0
Elsewhere: RCSB PDB 3NSM · PDBe 3NSM · UniProt Q06GJ0

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