MolNFT v1 · #73110 · protein

C500S mutant of cueo bound to CU(II)

3NSC · Blue copper oxidase cueo: “C500S mutant of cueo bound to CU(II)”. X-ray diffraction, 2 ligands (CU, SO4), 4 pockets (best druggability 0.46). MolNFT v1 #73110 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 3NSC
Type: protein
Length: 470 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Blue copper oxidase cueo
UniProt: P36649
Ligands: CU, SO4
Pockets: 4 · best druggability 0.46

Structure

x-ray diffraction · 1 distinct chain · 11% helix, 41% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Blue copper oxidase cueo	protein	470	11% helix, 41% strand	P36649

Ligands and binding sites

CU · Copper (II) ion · metal · 3 copies · chains A
SO4 · Sulfate ion · ion · chains A
ACT · Acetate ion · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

4 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	63	0.46	0.84	20	empty
2	81	0.42	0.79	20	empty
3	113	0.41	0.76	22	empty
4	73	0.32	0.74	18	empty

Compared structures

3NSC · C500S MUTANT OF CueO BOUND TO Cu(II) · the same entry in another collection · chain A against A, TM-score 1.00
P36649 · AlphaFold monomer V2.0 prediction for blue copper oxidase cueo (P36649) · a predicted model of the same protein · chain A against A, TM-score 0.98

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P36649
Elsewhere: RCSB PDB 3NSC · PDBe 3NSC · UniProt P36649

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