MolNFT v1 · #72968 · protein
Crystal structure of the centromere-binding protein parb from plasmid PCXC100
3NO7 · Putative plasmid related protein: “Crystal structure of the centromere-binding protein parb from plasmid PCXC100”. X-ray diffraction, 1 ligand (SO4). MolNFT v1 #72968 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 3NO7
- Type
- protein
- Length
- 119 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Putative plasmid related protein
- UniProt
- Q6EEF9
- Ligands
- SO4
Structure
x-ray diffraction · 2 distinct chains · 64% helix, 5% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Putative plasmid related protein | protein | 60 | 63% helix, 5% strand | Q6EEF9 |
| B | Putative plasmid related protein | protein | 59 | 64% helix, 5% strand | Q6EEF9 |
Ligands and binding sites
- SO4 · Sulfate ion · ion · 10 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
1 interface between chains.
- A–B · 1850 Ų buried · 20 hydrogen bonds · protein-protein
Compared structures
- 3NO7 · Crystal structure of the centromere-binding protein ParB from plasmid pCXC100 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6EEF9
- Elsewhere: RCSB PDB 3NO7 · PDBe 3NO7 · UniProt Q6EEF9
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