MolNFT v1 · #72939 · protein + RNA

Crystal structure of CUGBP1 RRM1/2-RNA complex

3NNC · Cugbp elav-like family member 1: “Crystal structure of CUGBP1 RRM1/2-RNA complex”. X-ray diffraction. MolNFT v1 #72939 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 3NNC
Type: protein + RNA
Length: 181 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Cugbp elav-like family member 1; RNA (5'-R(*UP*GP*UP*GP*UP*GP*UP*UP*GP*UP*GP*UP*G)-3')
UniProt: Q92879

Structure

x-ray diffraction · 2 distinct chains · 26% helix, 31% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Cugbp elav-like family member 1	protein	175	26% helix, 31% strand	Q92879
B	RNA (5'-R(UPGPUPGPUPGPUPUPGPUPGPUP*G)-3')	rna	6	—	—

Interfaces

1 interface between chains.

A–B · 590 Å² buried · 9 hydrogen bonds · protein-nucleic

Compared structures

3NNC · Crystal Structure of CUGBP1 RRM1/2-RNA Complex · the same entry in another collection · chain A against A, TM-score 1.00
Q92879 · AlphaFold monomer V2.0 prediction for cugbp elav-like family member 1 (Q92879) · a predicted model of the same protein · chain A against A, TM-score 0.76

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q92879
Elsewhere: RCSB PDB 3NNC · PDBe 3NNC · UniProt Q92879

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