MolNFT v1 · #71927 · protein
Crystal structure of glutaredoxin 1 from francisella tularensis complexed with cacodylate
3MSZ: “Crystal structure of glutaredoxin 1 from francisella tularensis complexed with cacodylate”. X-ray diffraction, 1 ligand (GSH). MolNFT v1 #71927 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 3MSZ
- Type
- protein
- Length
- 173 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Glutaredoxin 1
- UniProt
- Q5NHD0
- Ligands
- GSH
Structure
x-ray diffraction · 2 distinct chains · 41% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Glutaredoxin 1 | protein | 86 | 40% helix, 20% strand | Q5NHD0 |
| B | Glutaredoxin 1 | protein | 87 | 43% helix, 20% strand | Q5NHD0 |
Ligands and binding sites
- GSH · Glutathione · ligand · 2 copies · chains A, B
- CAC · Cacodylate ion · additive · chains A
- GOL · Glycerol · additive · chains B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
1 interface between chains.
- A–B · 137 Ų buried · 0 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 4 modified, 2 disulfide (engineered, disulfide).
Compared structures
- 3MSZ · Crystal Structure of Glutaredoxin 1 from Francisella tularensis Complexed with Cacodylate · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5NHD0
- Elsewhere: RCSB PDB 3MSZ · PDBe 3MSZ · UniProt Q5NHD0
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