MolNFT v1 · #71750 · protein
Crystal structure of PAC2 family protein from streptomyces avermitilis ma
3MNF: “Crystal structure of PAC2 family protein from streptomyces avermitilis ma”. X-ray diffraction, 1 ligand (CL), 2 pockets (best druggability 0.43). MolNFT v1 #71750 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 3MNF
- Type
- protein
- Length
- 235 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- PAC2 family protein
- UniProt
- Q828L9
- Ligands
- CL
- Pockets
- 2 · best druggability 0.43
Structure
x-ray diffraction · 1 distinct chain · 35% helix, 28% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | PAC2 family protein | protein | 235 | 35% helix, 28% strand | Q828L9 |
Ligands and binding sites
- CL · Chloride ion · ion · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 149 | 0.43 | 0.75 | 25 | CL |
| 2 | 76 | 0.36 | 0.77 | 18 | empty |
Modifications
Observed in the structure: 3 modified (engineered).
Compared structures
- 3MNF · Crystal structure of PAC2 family protein from Streptomyces avermitilis MA · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q828L9
- Elsewhere: RCSB PDB 3MNF · PDBe 3MNF · UniProt Q828L9
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