MolNFT v1 · #71738 · protein

The crystal structure of a probable arac family transcriptional regulator from rhodopseudomonas palustris CGA009

3MN2: “The crystal structure of a probable arac family transcriptional regulator from rhodopseudomonas palustris…”. X-ray diffraction, 1 ligand (PO4), 1 pocket (best druggability 0.70). MolNFT v1 #71738 on GenesisL1: 3D structure, binding…

PDB: 3MN2
Type: protein
Length: 216 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Probable arac family transcriptional regulator
UniProt: Q6NCA5
Ligands: PO4
Pockets: 1 · best druggability 0.70

Structure

x-ray diffraction · 1 distinct chain · 70% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	Probable arac family transcriptional regulator	protein	108	70% helix, 0% strand	Q6NCA5

Ligands and binding sites

PO4 · Phosphate ion · ion · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	410	0.70	0.82	55	empty

Interfaces

1 interface between chains.

A–B · 646 Å² buried · 10 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 6 modified (engineered).

Compared structures

3MN2 · The crystal structure of a probable AraC family transcriptional regulator from… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q6NCA5
Elsewhere: RCSB PDB 3MN2 · PDBe 3MN2 · UniProt Q6NCA5

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