MolNFT v1 · #71592 · protein
Structure of banana lectin-pentamannose complex
3MIU: “Structure of banana lectin-pentamannose complex”. X-ray diffraction, 2 ligands (MAN, ZN). MolNFT v1 #71592 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 3MIU
- Type
- protein
- Length
- 278 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Lectin
- UniProt
- Q8L5H4
- Ligands
- MAN, ZN
Structure
x-ray diffraction · 2 distinct chains · 0% helix, 72% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Lectin | protein | 138 | 0% helix, 72% strand | Q8L5H4 |
| B | Lectin | protein | 140 | 0% helix, 72% strand | Q8L5H4 |
Ligands and binding sites
- MAN · alpha-D-mannopyranose · sugar · 8 copies · chains A, B
- ZN · Zinc ion · metal · 3 copies · chains A, B
- HEZ · Hexane-1,6-diol · additive · 3 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
1 interface between chains.
- A–B · 778 Ų buried · 14 hydrogen bonds · protein-protein
Compared structures
- 3MIU · Structure of Banana Lectin-pentamannose complex · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8L5H4
- Elsewhere: RCSB PDB 3MIU · PDBe 3MIU · UniProt Q8L5H4
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