MolNFT v1 · #71340 · protein
Crystal structure of fructose bisphosphate aldolase from encephalitozoon cuniculi, bound to fructose 1,6-bisphosphate
3MBF · Fructose-bisphosphate aldolase: “Crystal structure of fructose bisphosphate aldolase from encephalitozoon cuniculi, bound to fructose…”. X-ray diffraction, 1 ligand (2FP), 1 pocket (best druggability 0.63). MolNFT v1 #71340 on…
- PDB
- 3MBF
- Type
- protein
- Length
- 337 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Fructose-bisphosphate aldolase
- EC
- 4.1.2.13
- UniProt
- Q8SSM8
- Ligands
- 2FP
- Pockets
- 1 · best druggability 0.63
Structure
x-ray diffraction · 1 distinct chain · 51% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Fructose-bisphosphate aldolase (EC 4.1.2.13) | protein | 337 | 51% helix, 17% strand | Q8SSM8 |
Ligands and binding sites
- 2FP · 1,6-fructose diphosphate (linear form) · ligand · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 255 | 0.63 | 0.81 | 29 | 2FP |
Modifications
Observed in the structure: 1 covalent (covalent ligand).
Compared structures
- 3MBF · Crystal structure of fructose bisphosphate aldolase from Encephalitozoon cuniculi, bound… · the same entry in another collection · chain A against A, TM-score 1.00
- Q8SSM8 · AlphaFold monomer V2.0 prediction for fructose-bisphosphate aldolase (Q8SSM8) · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8SSM8
- Elsewhere: RCSB PDB 3MBF · PDBe 3MBF · UniProt Q8SSM8
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