MolNFT v1 · #71248 · protein

Protein structure of type III plasmid segregation tubz

3M8K · FTSZ/TUBULIN-related protein: “Protein structure of type III plasmid segregation tubz”. X-ray diffraction, 4 pockets (best druggability 0.53). MolNFT v1 #71248 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 3M8K
Type: protein
Length: 393 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: FTSZ/TUBULIN-related protein
UniProt: Q8KNP3
Pockets: 4 · best druggability 0.53

Structure

x-ray diffraction · 1 distinct chain · 44% helix, 19% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	FTSZ/TUBULIN-related protein	protein	393	44% helix, 19% strand	Q8KNP3

Pockets

4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	114	0.53	0.82	20	empty
2	194	0.51	0.77	26	empty
3	93	0.46	0.80	26	empty
4	62	0.28	0.73	15	empty

Modifications

Observed in the structure: 9 modified (engineered).

Compared structures

3M8K · Protein structure of type III plasmid segregation TubZ · the same entry in another collection · chain A against A, TM-score 1.00
Q8KNP3 · AlphaFold monomer V2.0 prediction for tubulin-like protein tubz (Q8KNP3) · a predicted model of the same protein · chain A against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q8KNP3
Elsewhere: RCSB PDB 3M8K · PDBe 3M8K · UniProt Q8KNP3

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