MolNFT v1 · #70839 · protein

Crystal structure of putative tetr-family transcriptional regulator (YP_752756.1) from syntrophomonas wolfei str. goettingen at 2.07 a resolution

3LWJ: “Crystal structure of putative tetr-family transcriptional regulator (YP_752756.1) from syntrophomonas wolfei…”. X-ray diffraction, 2 pockets (best druggability 0.65). MolNFT v1 #70839 on GenesisL1: 3D structure, binding sites and…

PDB: 3LWJ
Type: protein
Length: 193 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Putative tetr-family transcriptional regulator
UniProt: Q0B0W9
Pockets: 2 · best druggability 0.65

Structure

x-ray diffraction · 1 distinct chain · 78% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Putative tetr-family transcriptional regulator	protein	193	78% helix, 0% strand	Q0B0W9

Ligands and binding sites

EDO · 1,2-ethanediol · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	59	0.65	0.94	16	EDO
2	87	0.43	0.78	14	empty

Modifications

Observed in the structure: 3 modified (engineered).

Compared structures

3LWJ · Crystal structure of Putative TetR-family transcriptional regulator (YP_752756.1) from… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q0B0W9
Elsewhere: RCSB PDB 3LWJ · PDBe 3LWJ · UniProt Q0B0W9

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