MolNFT v1 · #7057 · protein

Crystal structure analysis of neuronal SEC1 from the squid L. pealei

1FVH: “Crystal structure analysis of neuronal SEC1 from the squid L. pealei”. X-ray diffraction, 3 pockets (best druggability 0.61). MolNFT v1 #7057 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 1FVH
Type: protein
Length: 546 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: SEC1
UniProt: O62547
Pockets: 3 · best druggability 0.61

Structure

x-ray diffraction · 1 distinct chain · 45% helix, 14% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	SEC1	protein	546	45% helix, 14% strand	O62547

Pockets

3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	337	0.61	0.78	40	empty
2	275	0.57	0.78	38	empty
3	88	0.35	0.75	17	empty

Compared structures

1FVH · Crystal structure analysis of neuronal SEC1 from the squid L. pealei · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt O62547
Elsewhere: RCSB PDB 1FVH · PDBe 1FVH · UniProt O62547

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.