MolNFT v1 · #70450 · protein

Crystal structure of conserved domain protein from vibrio cholerae O1 biovar eltor str. N16961

3LKV · Uncharacterized conserved domain protein: “Crystal structure of conserved domain protein from vibrio cholerae O1 biovar eltor str. N16961”. X-ray diffraction, 3 ligands (PHE, ZN, SO4), 1 pocket (best druggability 0.35). MolNFT v1…

PDB: 3LKV
Type: protein
Length: 296 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Uncharacterized conserved domain protein
UniProt: Q9KT04
Ligands: PHE, ZN, SO4
Pockets: 1 · best druggability 0.35

Structure

x-ray diffraction · 1 distinct chain · 43% helix, 21% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Uncharacterized conserved domain protein	protein	296	43% helix, 21% strand	Q9KT04

Ligands and binding sites

PHE · Phenylalanine · ligand · chains A
ZN · Zinc ion · metal · 3 copies · chains A
SO4 · Sulfate ion · ion · chains A
GOL · Glycerol · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	61	0.35	0.77	17	empty

Modifications

Observed in the structure: 2 modified (engineered).

Compared structures

3LKV · Crystal structure of conserved domain protein from vibrio cholerae o1 biovar eltor str.… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9KT04
Elsewhere: RCSB PDB 3LKV · PDBe 3LKV · UniProt Q9KT04

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