MolNFT v1 · #70364 · protein
Crystal structure of the extracellular domain of the putative histidine kinase SOHK1S-Z6
3LIC · Sensor protein: “Crystal structure of the extracellular domain of the putative histidine kinase SOHK1S-Z6”. X-ray diffraction, 2 pockets (best druggability 0.36). MolNFT v1 #70364 on GenesisL1: 3D structure, binding sites and…
- PDB
- 3LIC
- Type
- protein
- Length
- 265 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Sensor protein
- UniProt
- Q8EII0
- Pockets
- 2 · best druggability 0.36
Structure
x-ray diffraction · 1 distinct chain · 38% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Sensor protein | protein | 265 | 38% helix, 25% strand | Q8EII0 |
Ligands and binding sites
- EDO · 1,2-ethanediol · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 56 | 0.36 | 0.79 | 15 | empty |
| 2 | 59 | 0.32 | 0.75 | 11 | empty |
Modifications
Observed in the structure: 2 modified (engineered).
Compared structures
- 3LIC · Crystal Structure of the extracellular domain of the putative histidine kinase soHK1S-Z6 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8EII0
- Elsewhere: RCSB PDB 3LIC · PDBe 3LIC · UniProt Q8EII0
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