MolNFT v1 · #70335 · protein

Crystal structure of putative 6-PHOSPHOGLUCONOLACTONASE(YP_207848.1) from neisseria gonorrhoeae fa 1090 at 1.33 a resolution

3LHI: “Crystal structure of putative 6-PHOSPHOGLUCONOLACTONASE(YP_207848.1) from neisseria gonorrhoeae fa 1090 at…”. X-ray diffraction, 1 pocket (best druggability 0.51). MolNFT v1 #70335 on GenesisL1: 3D structure, binding sites and…

PDB: 3LHI
Type: protein
Length: 231 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Putative 6-phosphogluconolactonase
UniProt: Q5F8Q1
Pockets: 1 · best druggability 0.51

Structure

x-ray diffraction · 1 distinct chain · 38% helix, 21% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Putative 6-phosphogluconolactonase	protein	231	38% helix, 21% strand	Q5F8Q1

Ligands and binding sites

EDO · 1,2-ethanediol · additive · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	120	0.51	0.81	26	empty

Modifications

Observed in the structure: 4 modified (engineered).

Compared structures

3LHI · Crystal structure of Putative 6-phosphogluconolactonase(YP_207848.1) from Neisseria… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q5F8Q1
Elsewhere: RCSB PDB 3LHI · PDBe 3LHI · UniProt Q5F8Q1

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