MolNFT v1 · #69869 · protein
Crystal structure of isoprenoid biosynthesis protein with amidotransferase-like domain from ehrlichia chaffeensis at 1.90A resolution
3L3B · ES1 family protein: “Crystal structure of isoprenoid biosynthesis protein with amidotransferase-like domain from ehrlichia…”. X-ray diffraction, 3 pockets (best druggability 0.35). MolNFT v1 #69869 on GenesisL1: 3D structure…
- PDB
- 3L3B
- Type
- protein
- Length
- 423 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- ES1 family protein
- UniProt
- Q2GI86
- Pockets
- 3 · best druggability 0.35
Structure
x-ray diffraction · 2 distinct chains · 38% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | ES1 family protein | protein | 210 | 38% helix, 20% strand | Q2GI86 |
| B | ES1 family protein | protein | 213 | 38% helix, 21% strand | Q2GI86 |
Pockets
3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 89 | 0.35 | 0.75 | 18 | empty |
| 2 | 83 | 0.34 | 0.75 | 16 | empty |
| 3 | 58 | 0.31 | 0.75 | 12 | empty |
Interfaces
1 interface between chains.
- A–B · 1797 Ų buried · 33 hydrogen bonds · protein-protein
Compared structures
- 3L3B · Crystal structure of isoprenoid biosynthesis protein with amidotransferase-like domain… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q2GI86
- Elsewhere: RCSB PDB 3L3B · PDBe 3L3B · UniProt Q2GI86
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