MolNFT v1 · #69782 · protein

Crystal structure of salivary cystatin from the soft tick ornithodoros moubata

3L0R · Cystatin-2: “Crystal structure of salivary cystatin from the soft tick ornithodoros moubata”. X-ray diffraction, 1 ligand (CL). MolNFT v1 #69782 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 3L0R
Type: protein
Length: 216 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Cystatin-2
UniProt: Q6QD55
Ligands: CL

Structure

x-ray diffraction · 1 distinct chain · 13% helix, 51% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	Cystatin-2	protein	108	13% helix, 51% strand	Q6QD55

Ligands and binding sites

CL · Chloride ion · ion · 2 copies · chains A, B
GOL · Glycerol · additive · 3 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Interfaces

1 interface between chains.

A–B · 675 Å² buried · 15 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 4 disulfide (disulfide).

Compared structures

3L0R · Crystal Structure of Salivary Cystatin from the Soft Tick Ornithodoros moubata · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q6QD55
Elsewhere: RCSB PDB 3L0R · PDBe 3L0R · UniProt Q6QD55

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