MolNFT v1 · #69721 · protein
The crystal structure of the sensor domain of two-component sensor pfes from pseudomonas aeruginosa PA01
3KYZ · Sensor protein pfes: “The crystal structure of the sensor domain of two-component sensor pfes from pseudomonas aeruginosa PA01”. X-ray diffraction, 1 ligand (CL), 1 pocket (best druggability 0.43). MolNFT v1 #69721 on GenesisL1: 3D…
- PDB
- 3KYZ
- Type
- protein
- Length
- 112 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Sensor protein pfes
- EC
- 2.7.13.3
- UniProt
- Q04804
- Ligands
- CL
- Pockets
- 1 · best druggability 0.43
Structure
x-ray diffraction · 1 distinct chain · 47% helix, 14% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Sensor protein pfes (EC 2.7.13.3) | protein | 112 | 47% helix, 14% strand | Q04804 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 73 | 0.43 | 0.81 | 19 | empty |
Modifications
Observed in the structure: 2 modified (engineered).
Compared structures
- 3KYZ · The crystal structure of the sensor domain of two-component sensor PfeS from Pseudomonas… · the same entry in another collection · chain A against A, TM-score 1.00
- Q04804 · AlphaFold monomer V2.0 prediction for sensor protein pfes (Q04804) · a predicted model of the same protein · chain A against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q04804
- Elsewhere: RCSB PDB 3KYZ · PDBe 3KYZ · UniProt Q04804
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