MolNFT v1 · #69394 · protein
Staphylococcus epidermidis tcar (apo form)
3KP7 · Transcriptional regulator tcar: “Staphylococcus epidermidis tcar (apo form)”. X-ray diffraction, 2 pockets (best druggability 0.83). MolNFT v1 #69394 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 3KP7
- Type
- protein
- Length
- 282 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Transcriptional regulator tcar
- UniProt
- Q5HLN6
- Pockets
- 2 · best druggability 0.83
Structure
x-ray diffraction · 2 distinct chains · 77% helix, 4% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Transcriptional regulator tcar | protein | 140 | 77% helix, 4% strand | Q5HLN6 |
| B | Transcriptional regulator tcar | protein | 142 | 77% helix, 4% strand | Q5HLN6 |
Pockets
2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1135 | 0.83 | 0.84 | 103 | empty |
| 2 | 291 | 0.79 | 0.90 | 33 | empty |
Interfaces
1 interface between chains.
- A–B · 2806 Ų buried · 28 hydrogen bonds · protein-protein
Compared structures
- 3KP7 · Staphylococcus epidermidis TcaR (apo form) · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5HLN6
- Elsewhere: RCSB PDB 3KP7 · PDBe 3KP7 · UniProt Q5HLN6
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