MolNFT v1 · #69342 · protein
Beta turn optimization of the gene-3-protein of filamentous phage fd
3KNQ · Attachment protein G3P: “Beta turn optimization of the gene-3-protein of filamentous phage fd”. X-ray diffraction, 1 pocket (best druggability 0.77). MolNFT v1 #69342 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 3KNQ
- Type
- protein
- Length
- 372 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Attachment protein G3P
- UniProt
- P03661
- Pockets
- 1 · best druggability 0.77
Structure
x-ray diffraction · 2 distinct chains · 5% helix, 41% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Attachment protein G3P | protein | 189 | 4% helix, 40% strand | P03661 |
| B | Attachment protein G3P | protein | 183 | 5% helix, 43% strand | P03661 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 767 | 0.77 | 0.81 | 61 | empty |
Interfaces
1 interface between chains.
- A–B · 839 Ų buried · 9 hydrogen bonds · protein-protein
Compared structures
- 3KNQ · Beta Turn Optimization of the Gene-3-Protein of Filamentous Phage Fd · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P03661
- Elsewhere: RCSB PDB 3KNQ · PDBe 3KNQ · UniProt P03661
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