MolNFT v1 · #6914 · protein
The high resolution structure of a molybdate binding protein from sporomusa ovata
1FR3 · MOLYBDATE/TUNGSTATE binding protein: “The high resolution structure of a molybdate binding protein from sporomusa ovata”. X-ray diffraction, 1 ligand (WO4), 1 pocket (best druggability 0.39). MolNFT v1 #6914 on GenesisL1: 3D…
- PDB
- 1FR3
- Type
- protein
- Length
- 804 residues
- Chains
- 12
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- MOLYBDATE/TUNGSTATE binding protein
- UniProt
- Q7SIF7
- Ligands
- WO4
- Pockets
- 1 · best druggability 0.39
Structure
x-ray diffraction · 1 distinct chain · 15% helix, 57% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, C, D, E, F, G, H, I, J, K, L | MOLYBDATE/TUNGSTATE binding protein | protein | 67 | 15% helix, 57% strand | Q7SIF7 |
Ligands and binding sites
- WO4 · Tungstate(vi)ion · ion · 16 copies · chains A, C, D, E, B, F, G, I, J, K, H, L
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 117 | 0.39 | 0.75 | 21 | empty |
Interfaces
31 interfaces between chains.
- G–H · 1569 Ų buried · 25 hydrogen bonds · protein-protein
- A–B · 1561 Ų buried · 28 hydrogen bonds · protein-protein
- I–J · 1556 Ų buried · 26 hydrogen bonds · protein-protein
- K–L · 1549 Ų buried · 26 hydrogen bonds · protein-protein
- E–F · 1544 Ų buried · 25 hydrogen bonds · protein-protein
Compared structures
- 1FR3 · The high resolution structure of a molybdate binding protein from sporomusa ovata · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q7SIF7
- Elsewhere: RCSB PDB 1FR3 · PDBe 1FR3 · UniProt Q7SIF7
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