MolNFT v1 · #68865 · protein
Crystal structure of protein of unknown function (YP_427503.1) from rhodospirillum rubrum atcc 11170 at 2.75 a resolution
3K8R · Uncharacterized protein: “Crystal structure of protein of unknown function (YP_427503.1) from rhodospirillum rubrum atcc 11170 at 2.75…”. X-ray diffraction. MolNFT v1 #68865 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 3K8R
- Type
- protein
- Length
- 168 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Uncharacterized protein
- UniProt
- Q2RRM9
Structure
x-ray diffraction · 2 distinct chains · 18% helix, 33% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Uncharacterized protein | protein | 85 | 20% helix, 33% strand | Q2RRM9 |
| B | Uncharacterized protein | protein | 83 | 16% helix, 34% strand | Q2RRM9 |
Ligands and binding sites
- EDO · 1,2-ethanediol · additive · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
1 interface between chains.
- A–B · 574 Ų buried · 5 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 4 modified (engineered).
Compared structures
- 3K8R · Crystal structure of protein of unknown function (YP_427503.1) from Rhodospirillum rubrum… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q2RRM9
- Elsewhere: RCSB PDB 3K8R · PDBe 3K8R · UniProt Q2RRM9
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