MolNFT v1 · #68486 · protein

Crystal structure of putative phosphoheptose isomerase (YP_001815198.1) from exiguobacterium sp. 255-15 at 1.95 a resolution

3JX9: “Crystal structure of putative phosphoheptose isomerase (YP_001815198.1) from exiguobacterium sp. 255-15 at…”. X-ray diffraction, 1 ligand (CL), 1 pocket (best druggability 0.27). MolNFT v1 #68486 on GenesisL1: 3D structure, binding…

PDB: 3JX9
Type: protein
Length: 338 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Putative phosphoheptose isomerase
UniProt: B1YEL3
Ligands: CL
Pockets: 1 · best druggability 0.27

Structure

x-ray diffraction · 1 distinct chain · 49% helix, 15% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	Putative phosphoheptose isomerase	protein	169	49% helix, 15% strand	B1YEL3

Ligands and binding sites

CL · Chloride ion · ion · 3 copies · chains A, B
GOL · Glycerol · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	55	0.27	0.74	17	empty

Interfaces

1 interface between chains.

A–B · 1704 Å² buried · 7 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 8 modified (engineered).

Compared structures

3JX9 · Crystal structure of Putative phosphoheptose isomerase (YP_001815198.1) from… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt B1YEL3
Elsewhere: RCSB PDB 3JX9 · PDBe 3JX9 · UniProt B1YEL3

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