MolNFT v1 · #67969 · protein + RNA
Core of mammalian 80S pre-ribosome in complex with trnas fitted to a 10.6A cryo-EM MAP: rotated pre state 2
3J0Q: “Core of mammalian 80S pre-ribosome in complex with trnas fitted to a 10.6A cryo-EM MAP: rotated pre state 2”. Electron microscopy. MolNFT v1 #67969 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 3J0Q
- Type
- protein + RNA
- Length
- 1,520 residues
- Chains
- 21
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Structure
electron microscopy · 20 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| a | — | rna | 48 | — | — |
| c | — | rna | 17 | — | — |
| d | — | rna | 7 | — | — |
| g | — | rna | 31 | — | — |
| G | — | rna | 13 | — | — |
| f | — | rna | 21 | — | — |
| h | — | rna | 111 | — | — |
| S | — | protein | 125 | — | — |
| L | — | protein | 141 | — | — |
| X | — | protein | 68 | — | — |
| 2 | — | rna | 112 | — | — |
| 3 | — | rna | 12 | — | — |
| 9 | — | rna | 19 | — | — |
| 7 | — | rna | 50 | — | — |
| B | — | protein | 213 | — | — |
| J | — | protein | 208 | — | — |
| k | — | protein | 165 | — | — |
| Y, W | — | rna | 77 | — | — |
| y | — | rna | 3 | — | — |
| w | — | rna | 2 | — | — |
Compared structures
- 3J0Q · Core of mammalian 80S pre-ribosome in complex with tRNAs fitted to a 10.6A cryo-em map… · the same entry in another collection · chain a against a, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 3J0Q · PDBe 3J0Q
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