MolNFT v1 · #67924 · protein
Coordinates of the B1B bridge-forming protein structures fitted into the cryo-EM MAP of E.COLI 70S ribosome (emd-1056)
3IYX · 30S ribosomal protein S13: “Coordinates of the B1B bridge-forming protein structures fitted into the cryo-EM MAP of E.COLI 70S ribosome…”. Electron microscopy. MolNFT v1 #67924 on GenesisL1: 3D structure, binding sites and pockets…
- PDB
- 3IYX
- Type
- protein
- Length
- 362 residues
- Chains
- 3
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- 30S ribosomal protein S13; 50S ribosomal protein L5; 50S ribosomal protein L31
- UniProt
- D3QTD7, D3QTE7, D3QYD6
Structure
electron microscopy · 3 distinct chains · 0% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| M | 30S ribosomal protein S13 | protein | 114 | 0% helix, 0% strand | D3QTD7 |
| F | 50S ribosomal protein L5 | protein | 178 | 0% helix, 0% strand | D3QTE7 |
| A | 50S ribosomal protein L31 | protein | 70 | 0% helix, 0% strand | D3QYD6 |
Interfaces
2 interfaces between chains.
- F–A · 261 Ų buried · 0 hydrogen bonds · protein-protein
- M–A · 13 Ų buried · 0 hydrogen bonds · protein-protein
Compared structures
- 3IYX · Coordinates of the b1b bridge-forming protein structures fitted into the Cryo-EM map of… · the same entry in another collection · chain M against M, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt D3QTD7
- Every structure of UniProt D3QTE7
- Every structure of UniProt D3QYD6
- Elsewhere: RCSB PDB 3IYX · PDBe 3IYX · UniProt D3QTD7 · UniProt D3QTE7 · UniProt D3QYD6
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