MolNFT v1 · #67899 · protein
Variable domains of the computer generated model (wam) of Fab 15 fitted into the cryoem reconstruction of the virus-Fab 15 complex
3IY4 · Fragment of neutralizing antibody 15 (light chain): “Variable domains of the computer generated model (wam) of Fab 15 fitted into the cryoem reconstruction of the…”. Electron microscopy, 1 pocket (best druggability 0.69). MolNFT v1…
- PDB
- 3IY4
- Type
- protein
- Length
- 222 residues
- Chains
- 2
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Fragment of neutralizing antibody 15 (light chain); Fragment of neutralizing antibody 15…
- Pockets
- 1 · best druggability 0.69
Structure
electron microscopy · 2 distinct chains · 4% helix, 53% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Fragment of neutralizing antibody 15 (light chain) | protein | 111 | 3% helix, 54% strand | — |
| B | Fragment of neutralizing antibody 15 (heavy chain) | protein | 111 | 5% helix, 51% strand | — |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 60 | 0.69 | 0.96 | 16 | empty |
Interfaces
1 interface between chains.
- A–B · 863 Ų buried · 7 hydrogen bonds · protein-protein
Compared structures
- 3IY4 · Variable domains of the computer generated model (WAM) of Fab 15 fitted into the cryoEM… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 3IY4 · PDBe 3IY4
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.