MolNFT v1 · #67774 · protein
Crystal structure of the C2H2-type zinc finger domain of human ubi-D4
3IUF · Zinc finger protein ubi-D4: “Crystal structure of the C2H2-type zinc finger domain of human ubi-D4”. X-ray diffraction, 1 ligand (ZN). MolNFT v1 #67774 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 3IUF
- Type
- protein
- Length
- 32 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Zinc finger protein ubi-D4
- UniProt
- Q92785
- Ligands
- ZN
Structure
x-ray diffraction · 1 distinct chain · 31% helix, 13% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Zinc finger protein ubi-D4 | protein | 32 | 31% helix, 13% strand | Q92785 |
Ligands and binding sites
- ZN · Zinc ion · metal · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 3IUF · Crystal structure of the C2H2-type zinc finger domain of human ubi-d4 · the same entry in another collection · chain A against A, TM-score 1.00
- Q92785 · AlphaFold monomer V2.0 prediction for zinc finger protein ubi-D4 (Q92785) · a predicted model of the same protein · chain A against A, TM-score 0.77
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q92785
- Elsewhere: RCSB PDB 3IUF · PDBe 3IUF · UniProt Q92785
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