MolNFT v1 · #67687 · protein

Crystal structure of cysteine hydrolase PSPPH_2384 from pseudomonas syringae pv. phaseolicola 1448A

3IRV: “Crystal structure of cysteine hydrolase PSPPH_2384 from pseudomonas syringae pv. phaseolicola 1448A”. X-ray diffraction, 1 ligand (PO4), 1 pocket (best druggability 0.52). MolNFT v1 #67687 on GenesisL1: 3D structure, binding sites…

PDB: 3IRV
Type: protein
Length: 213 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Cysteine hydrolase
UniProt: Q48J46
Ligands: PO4
Pockets: 1 · best druggability 0.52

Structure

x-ray diffraction · 1 distinct chain · 42% helix, 21% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Cysteine hydrolase	protein	213	42% helix, 21% strand	Q48J46

Ligands and binding sites

PO4 · Phosphate ion · ion · chains A
GOL · Glycerol · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	55	0.52	0.87	15	empty

Compared structures

3IRV · CRYSTAL STRUCTURE OF CYSTEINE HYDROLASE PSPPH_2384 FROM Pseudomonas syringae pv.… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q48J46
Elsewhere: RCSB PDB 3IRV · PDBe 3IRV · UniProt Q48J46

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